Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | EJD96_RS17835 | Not Available | + | 3962348 - 3963229 | 32969.2 |
| flavodoxin family protein | EJD96_RS17840 | Not Available | - | 3963318 - 3963893 | 20273.0 |
| pirin family protein | EJD96_RS17845 | Not Available | - | 3964006 - 3964707 | 25339.6 |
| lysr family transcriptional regulator | EJD96_RS17850 | Not Available | + | 3964857 - 3965795 | 34052.5 |
| trna glutamyl-q(34) synthetase gluqrs | EJD96_RS17855 | Not Available | + | 3965792 - 3966676 | 31925.9 |
| dead/deah box helicase | EJD96_RS17860 | Not Available | - | 3966686 - 3968149 | 53143.7 |
| fumarylacetoacetate hydrolase family protein | EJD96_RS17865 | Not Available | - | 3968452 - 3969135 | 24168.9 |
| tetratricopeptide repeat protein | EJD96_RS17870 | Not Available | + | 3969441 - 3971252 | 67796.4 |
| glucokinase | EJD96_RS17875 | Not Available | + | 3971390 - 3972385 | 34533.5 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 3972531 - 3972629 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.