Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EJD96_RS17785 | Not Available | + | 3948967 - 3949437 | 17509.2 |
| maf family protein | EJD96_RS17790 | Not Available | + | 3949493 - 3950107 | 22276.0 |
| ribonuclease g | EJD96_RS17795 | Not Available | + | 3950104 - 3951567 | 54824.3 |
| hypothetical protein | EJD96_RS17800 | Not Available | + | 3951600 - 3952232 | 23284.1 |
| lipid a export permease/atp-binding protein msba | EJD96_RS17805 | Not Available | + | 3952408 - 3954144 | 63567.0 |
| glycosyltransferase family 9 protein | EJD96_RS17810 | Not Available | + | 3954147 - 3955250 | 42048.7 |
| glycosyltransferase family 8 protein | EJD96_RS17815 | Not Available | + | 3955250 - 3956236 | 37874.6 |
| glycosyltransferase family 8 protein | EJD96_RS17820 | Not Available | + | 3956255 - 3957271 | 38304.1 |
| o-antigen ligase family protein | EJD96_RS17825 | Not Available | - | 3957272 - 3958480 | 43453.9 |
| dna polymerase iii subunit alpha | EJD96_RS17830 | Not Available | - | 3958647 - 3962105 | 128164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.