Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS24140 | Not Available | - | 3939339 - 3939509 | 6039.31 |
| quinone oxidoreductase family protein | EJD96_RS17740 | Not Available | - | 3939518 - 3940492 | 34167.1 |
| dmt family transporter | EJD96_RS17745 | Not Available | - | 3940562 - 3941476 | 32964.7 |
| helicase hera-like c-terminal domain-containing protein | EJD96_RS17750 | Not Available | - | 3941562 - 3943229 | 59093.1 |
| yebc/pmpr family dna-binding transcriptional regulator | EJD96_RS17755 | Not Available | + | 3943453 - 3944178 | 26158.8 |
| phosphoribosylamine--glycine ligase | EJD96_RS17760 | Not Available | + | 3944224 - 3945492 | 44985.2 |
| mechanosensitive ion channel family protein | EJD96_RS17765 | Not Available | + | 3945658 - 3946488 | 29755.6 |
| oxygen-dependent coproporphyrinogen oxidase | EJD96_RS17770 | Not Available | + | 3946622 - 3947542 | 34725.8 |
| nicotinate-nucleotide adenylyltransferase | EJD96_RS17775 | Not Available | + | 3947542 - 3948207 | 24965.8 |
| ribosome silencing factor | EJD96_RS17780 | Not Available | + | 3948212 - 3948967 | 26409.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.