Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3297 family protein | EJD96_RS17690 | Not Available | + | 3926015 - 3926263 | 9317.17 |
| pep-cterm sorting domain-containing protein | EJD96_RS17695 | Not Available | - | 3926406 - 3927008 | 21645.7 |
| methyl-accepting chemotaxis protein | EJD96_RS17700 | Not Available | - | 3927351 - 3929291 | 68933.6 |
| substrate-binding periplasmic protein | EJD96_RS17705 | Not Available | - | 3929613 - 3930410 | 29581.9 |
| eama family transporter rard | EJD96_RS17710 | Not Available | + | 3930657 - 3931559 | 32427.5 |
| sensor domain-containing diguanylate cyclase | EJD96_RS17715 | Not Available | + | 3931684 - 3933261 | 57640.9 |
| class 1 fructose-bisphosphatase | EJD96_RS17720 | Not Available | - | 3933278 - 3934279 | 36965.5 |
| aminopeptidase n | EJD96_RS17725 | Not Available | - | 3934339 - 3937035 | 100391.0 |
| duf4136 domain-containing protein | EJD96_RS17730 | Not Available | + | 3937346 - 3937999 | 24284.8 |
| abc transporter substrate-binding protein | EJD96_RS17735 | Not Available | - | 3938012 - 3939163 | 41400.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.