Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1329 domain-containing protein | EJD96_RS17605 | Not Available | + | 3899677 - 3901038 | 50368.3 |
| duf1302 domain-containing protein | EJD96_RS17610 | Not Available | + | 3901079 - 3902770 | 60115.9 |
| efflux rnd transporter permease subunit | EJD96_RS17615 | Not Available | + | 3902871 - 3905240 | 86355.2 |
| wd40/yvtn/bnr-like repeat-containing protein | EJD96_RS17620 | Not Available | + | 3905256 - 3906251 | 34349.4 |
| aldehyde dehydrogenase family protein | EJD96_RS17625 | Not Available | - | 3906481 - 3907911 | 50280.4 |
| primary-amine oxidase | EJD96_RS17630 | Not Available | - | 3907988 - 3910279 | 84609.7 |
| hypothetical protein | EJD96_RS24130 | Not Available | + | 3910783 - 3910947 | 6054.49 |
| hypothetical protein | EJD96_RS17635 | Not Available | - | 3911019 - 3911855 | 29944.3 |
| sigma-70 family rna polymerase sigma factor | EJD96_RS17640 | Not Available | + | 3912409 - 3912909 | 18631.5 |
| duf4880 domain-containing protein | EJD96_RS17645 | Not Available | + | 3912918 - 3913868 | 33932.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.