Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EJD96_RS17555 | Not Available | - | 3888936 - 3889832 | 31992.5 |
| rrf2 family transcriptional regulator | EJD96_RS17560 | Not Available | - | 3889932 - 3890375 | 16114.5 |
| osmc domain/ycao domain-containing protein | EJD96_RS17565 | Not Available | + | 3890592 - 3892802 | 82283.3 |
| response regulator | EJD96_RS17570 | Not Available | + | 3893052 - 3893429 | 13415.3 |
| sensor histidine kinase | EJD96_RS17575 | Not Available | + | 3893577 - 3894782 | 43945.1 |
| gin domain-containing protein | EJD96_RS17580 | Not Available | - | 3894845 - 3895684 | 30924.8 |
| padr family transcriptional regulator | EJD96_RS17585 | Not Available | - | 3895677 - 3896006 | 12107.4 |
| helix-turn-helix domain-containing protein | EJD96_RS17590 | Not Available | + | 3896206 - 3896838 | 23789.4 |
| pin domain-containing protein | EJD96_RS17595 | Not Available | + | 3896838 - 3897383 | 20473.8 |
| helix-turn-helix domain-containing protein | EJD96_RS17600 | Not Available | + | 3897949 - 3898944 | 37071.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.