Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS17455 | Not Available | + | 3870102 - 3870608 | 18167.4 |
| Trna-thr | Not Available | Not Available | + | 3870737 - 3870812 | Not Available |
| hypothetical protein | EJD96_RS17465 | Not Available | + | 3871026 - 3871262 | 8880.7 |
| is3 family transposase | EJD96_RS17470 | Not Available | + | 3871966 - 3873146 | 44118.6 |
| hypothetical protein | EJD96_RS17475 | Not Available | - | 3873641 - 3874177 | 19330.5 |
| methyl-accepting chemotaxis protein | EJD96_RS17480 | Not Available | + | 3874842 - 3876464 | 57629.6 |
| hypothetical protein | EJD96_RS17485 | Not Available | + | 3876647 - 3876994 | 12958.7 |
| lysr family transcriptional regulator | EJD96_RS17490 | Not Available | - | 3877061 - 3877954 | 32317.2 |
| nad-dependent epimerase/dehydratase family protein | EJD96_RS17495 | Not Available | + | 3878063 - 3878995 | 33436.0 |
| hypothetical protein | EJD96_RS17500 | Not Available | + | 3879190 - 3879873 | 23859.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.