Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c39 family peptidase | EJD96_RS17405 | Not Available | + | 3854601 - 3855344 | 27651.9 |
| atp-dependent rna helicase hrpa | EJD96_RS17410 | Not Available | - | 3855383 - 3859450 | 151994.0 |
| amino-acid n-acetyltransferase | EJD96_RS17415 | Not Available | + | 3859635 - 3860948 | 47566.6 |
| oxidative damage protection protein | EJD96_RS17420 | Not Available | + | 3861045 - 3861317 | 10164.3 |
| m16 family metallopeptidase | EJD96_RS17425 | Not Available | + | 3861450 - 3864218 | 102097.0 |
| ribose-5-phosphate isomerase rpia | EJD96_RS17430 | Not Available | - | 3864449 - 3865120 | 23373.4 |
| cation:proton antiporter | EJD96_RS17435 | Not Available | - | 3865221 - 3866984 | 63630.7 |
| lrp/asnc family transcriptional regulator | EJD96_RS17440 | Not Available | - | 3867508 - 3868020 | 19633.8 |
| branched-chain amino acid abc transporter substrate-binding protein | EJD96_RS17445 | Not Available | + | 3868227 - 3869369 | 39217.1 |
| plasmid stabilization protein | EJD96_RS17450 | Not Available | - | 3869510 - 3869830 | 11757.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.