Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | EJD96_RS17355 | Not Available | - | 3846713 - 3847243 | 18912.6 |
| chromate transporter | EJD96_RS17360 | Not Available | - | 3847240 - 3847854 | 22051.2 |
| lysr family transcriptional regulator | EJD96_RS17365 | Not Available | + | 3847955 - 3848881 | 33143.4 |
| dctp deaminase | EJD96_RS17370 | Not Available | - | 3848984 - 3849553 | 21180.1 |
| enhanced serine sensitivity protein sseb c-terminal domain-containing protein | EJD96_RS17375 | Not Available | - | 3849677 - 3850471 | 29008.9 |
| hypothetical protein | EJD96_RS17380 | Not Available | + | 3850617 - 3852074 | 53644.8 |
| duf3418 domain-containing protein | EJD96_RS17385 | Not Available | - | 3852100 - 3852522 | 16202.7 |
| hypothetical protein | EJD96_RS17390 | Not Available | + | 3852902 - 3853819 | 33418.2 |
| hypothetical protein | EJD96_RS17395 | Not Available | + | 3853868 - 3854311 | 15670.7 |
| hypothetical protein | EJD96_RS17400 | Not Available | + | 3854366 - 3854620 | 9095.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.