Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EJD96_RS17305 | Not Available | + | 3831987 - 3832772 | 27507.2 |
| 3-keto-5-aminohexanoate cleavage protein | EJD96_RS17310 | Not Available | + | 3832858 - 3833790 | 34069.0 |
| thymidylate synthase | EJD96_RS17315 | Not Available | + | 3833948 - 3834919 | 36385.4 |
| nad(p)h-dependent flavin oxidoreductase | EJD96_RS17320 | Not Available | + | 3834982 - 3836052 | 37587.1 |
| efflux transporter outer membrane subunit | EJD96_RS17325 | Not Available | - | 3836089 - 3837522 | 51370.1 |
| efflux rnd transporter periplasmic adaptor subunit | EJD96_RS17330 | Not Available | - | 3837661 - 3838869 | 43656.3 |
| glucans biosynthesis glucosyltransferase mdoh | EJD96_RS17335 | Not Available | - | 3839013 - 3841661 | 98388.2 |
| glucan biosynthesis protein g | EJD96_RS17340 | Not Available | - | 3841634 - 3843253 | 60395.5 |
| dihydrofolate reductase | EJD96_RS17345 | Not Available | + | 3843580 - 3844074 | 18037.3 |
| arginine/lysine/ornithine decarboxylase | EJD96_RS17350 | Not Available | + | 3844288 - 3846540 | 84625.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.