Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | EJD96_RS17255 | Not Available | + | 3820230 - 3821933 | 62604.4 |
| nnrs family protein | EJD96_RS24430 | Not Available | + | 3822057 - 3822296 | 8743.97 |
| methyl-accepting chemotaxis protein | EJD96_RS17265 | Not Available | + | 3822519 - 3824270 | 61583.6 |
| ergothioneine biosynthesis protein egtb | EJD96_RS17270 | Not Available | - | 3824290 - 3825675 | 51809.0 |
| l-histidine n(alpha)-methyltransferase | EJD96_RS17275 | Not Available | - | 3825730 - 3826698 | 35773.7 |
| abc transporter transmembrane domain-containing protein | EJD96_RS17280 | Not Available | + | 3827050 - 3828894 | 65383.7 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS17285 | Not Available | + | 3829034 - 3829522 | 17515.0 |
| deda family protein | EJD96_RS17290 | Not Available | - | 3829693 - 3830334 | 23604.7 |
| hypothetical protein | EJD96_RS17295 | Not Available | + | 3830609 - 3830926 | 11719.7 |
| gntr family transcriptional regulator | EJD96_RS17300 | Not Available | - | 3830954 - 3831658 | 25450.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.