Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EJD96_RS17205 | Not Available | - | 3807190 - 3808779 | 57884.1 |
| abc transporter permease | EJD96_RS17210 | Not Available | - | 3808776 - 3809837 | 39297.9 |
| microcin c abc transporter permease yejb | EJD96_RS17215 | Not Available | - | 3809834 - 3810889 | 39002.3 |
| extracellular solute-binding protein | EJD96_RS17220 | Not Available | - | 3810950 - 3812767 | 67933.8 |
| enoyl-acp reductase fabi | EJD96_RS17225 | Not Available | + | 3813091 - 3813873 | 27320.8 |
| dead/deah box helicase | EJD96_RS17230 | Not Available | + | 3814263 - 3815795 | 55207.9 |
| membrane integrity-associated transporter subunit pqic | EJD96_RS17235 | Not Available | - | 3815885 - 3816520 | 22068.2 |
| intermembrane transport protein pqib | EJD96_RS17240 | Not Available | - | 3816520 - 3818148 | 59714.6 |
| paraquat-inducible protein a | EJD96_RS17245 | Not Available | - | 3818145 - 3818813 | 24451.1 |
| paraquat-inducible protein a | EJD96_RS17250 | Not Available | - | 3818852 - 3819481 | 23364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.