Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EJD96_RS17100 | Not Available | - | 3784343 - 3785170 | 30603.9 |
| abc transporter substrate-binding protein | EJD96_RS17105 | Not Available | - | 3785313 - 3786326 | 36039.5 |
| abc transporter substrate-binding protein | EJD96_RS17110 | Not Available | - | 3786392 - 3787453 | 37682.8 |
| response regulator | EJD96_RS17115 | Not Available | + | 3787721 - 3788389 | 24969.6 |
| sensor histidine kinase | EJD96_RS17120 | Not Available | + | 3788390 - 3789769 | 49671.3 |
| abc transporter substrate-binding protein | EJD96_RS17125 | Not Available | + | 3790098 - 3791369 | 46331.9 |
| carbohydrate abc transporter permease | EJD96_RS17130 | Not Available | + | 3791447 - 3792325 | 32687.1 |
| carbohydrate abc transporter permease | EJD96_RS17135 | Not Available | + | 3792313 - 3793125 | 29380.0 |
| nad(p)-dependent alcohol dehydrogenase | EJD96_RS17140 | Not Available | + | 3793135 - 3794172 | 36541.5 |
| abc transporter atp-binding protein | EJD96_RS17145 | Not Available | + | 3794175 - 3795395 | 44001.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.