Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | EJD96_RS17000 | Not Available | + | 3760104 - 3761318 | 45374.4 |
| hypothetical protein | EJD96_RS17005 | Not Available | - | 3761505 - 3761687 | 6348.37 |
| magnesium-translocating p-type atpase | EJD96_RS17010 | Not Available | + | 3762555 - 3765317 | 102025.0 |
| lysozyme inhibitor lpri family protein | EJD96_RS17015 | Not Available | - | 3765518 - 3765937 | 16028.2 |
| suppressor of fused domain protein | EJD96_RS17020 | Not Available | - | 3766044 - 3767159 | 41076.5 |
| tetr/acrr family transcriptional regulator | EJD96_RS17025 | Not Available | - | 3767298 - 3767855 | 20588.9 |
| duf1348 family protein | EJD96_RS17030 | Not Available | - | 3767865 - 3768335 | 18502.5 |
| hypothetical protein | EJD96_RS17035 | Not Available | + | 3768693 - 3769157 | 17105.1 |
| sensor histidine kinase | EJD96_RS17040 | Not Available | - | 3769199 - 3770317 | 41544.4 |
| chemotaxis protein cheb | EJD96_RS17045 | Not Available | - | 3770314 - 3770949 | 22375.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.