Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | EJD96_RS16950 | Not Available | - | 3750227 - 3752539 | 84224.4 |
| thiamine-phosphate kinase | EJD96_RS16955 | Not Available | + | 3752916 - 3753881 | 33864.6 |
| phosphatidylglycerophosphatase a | EJD96_RS16960 | Not Available | + | 3753878 - 3754420 | 20227.7 |
| cina family protein | EJD96_RS16965 | Not Available | + | 3754562 - 3755044 | 16440.5 |
| orotidine-5'-phosphate decarboxylase | EJD96_RS16970 | Not Available | - | 3755137 - 3755955 | 29462.2 |
| lema family protein | EJD96_RS16975 | Not Available | + | 3756122 - 3756715 | 21934.0 |
| tpm domain-containing protein | EJD96_RS16980 | Not Available | + | 3756737 - 3757594 | 29822.6 |
| tpm domain-containing protein | EJD96_RS16985 | Not Available | + | 3757596 - 3758129 | 19734.7 |
| hypothetical protein | EJD96_RS16990 | Not Available | + | 3758140 - 3758430 | 9606.19 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EJD96_RS16995 | Not Available | - | 3758448 - 3759815 | 48923.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.