Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | EJD96_RS16900 | Not Available | - | 3739996 - 3740739 | 26130.3 |
| merr family transcriptional regulator | EJD96_RS16905 | Not Available | + | 3740913 - 3741347 | 16243.5 |
| aldo/keto reductase | EJD96_RS16910 | Not Available | + | 3741344 - 3742375 | 37415.6 |
| carbonic anhydrase | EJD96_RS16915 | Not Available | - | 3742400 - 3743038 | 23016.5 |
| csgg/hfab family protein | EJD96_RS16920 | Not Available | + | 3743313 - 3743981 | 23585.8 |
| duf4810 domain-containing protein | EJD96_RS16925 | Not Available | + | 3744014 - 3744385 | 13628.3 |
| duf799 domain-containing protein | EJD96_RS16930 | Not Available | + | 3744382 - 3745047 | 23602.4 |
| sigma-54-dependent transcriptional regulator | EJD96_RS16935 | Not Available | - | 3745154 - 3746491 | 48316.2 |
| atp-binding protein | EJD96_RS16940 | Not Available | - | 3746491 - 3748293 | 65573.2 |
| mfs family transporter | EJD96_RS16945 | Not Available | - | 3748400 - 3749773 | 48965.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.