Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | EJD96_RS16855 | Not Available | + | 3729482 - 3730363 | 32896.7 |
| cytochrome c | EJD96_RS16860 | Not Available | - | 3730455 - 3731780 | 46833.4 |
| gmc family oxidoreductase | EJD96_RS16865 | Not Available | - | 3731792 - 3733573 | 65141.0 |
| gluconate 2-dehydrogenase subunit 3 family protein | EJD96_RS16870 | Not Available | - | 3733576 - 3734298 | 26410.4 |
| dienelactone hydrolase family protein | EJD96_RS16875 | Not Available | - | 3734470 - 3735237 | 27032.4 |
| yjgn family protein | EJD96_RS16880 | Not Available | + | 3735571 - 3736662 | 40040.2 |
| m48 family metallopeptidase | EJD96_RS16885 | Not Available | + | 3736667 - 3737656 | 36052.6 |
| hypothetical protein | EJD96_RS24125 | Not Available | - | 3737747 - 3737896 | 5628.59 |
| lysr family transcriptional regulator | EJD96_RS16890 | Not Available | - | 3738103 - 3738966 | 31609.4 |
| class a beta-lactamase | EJD96_RS16895 | Not Available | + | 3739081 - 3739980 | 31710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.