Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ldh family oxidoreductase | EJD96_RS16805 | Not Available | - | 3717394 - 3718455 | 37003.3 |
| tripartite tricarboxylate transporter permease | EJD96_RS16810 | Not Available | - | 3718507 - 3720003 | 52636.4 |
| tripartite tricarboxylate transporter tctb family protein | EJD96_RS16815 | Not Available | - | 3720013 - 3720543 | 19066.1 |
| tripartite tricarboxylate transporter substrate binding protein | EJD96_RS16820 | Not Available | - | 3720628 - 3721659 | 35569.2 |
| hypothetical protein | EJD96_RS16825 | Not Available | + | 3722305 - 3722517 | 7596.05 |
| ilvd/edd family dehydratase | EJD96_RS16830 | Not Available | + | 3722646 - 3724382 | 63175.0 |
| c-terminal binding protein | EJD96_RS16835 | Not Available | + | 3724661 - 3725620 | 34783.8 |
| abc transporter atp-binding protein | EJD96_RS16840 | Not Available | + | 3725871 - 3726956 | 39528.6 |
| abc transporter substrate-binding protein | EJD96_RS16845 | Not Available | + | 3727081 - 3728412 | 48183.2 |
| carbohydrate abc transporter permease | EJD96_RS16850 | Not Available | + | 3728583 - 3729482 | 33182.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.