Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS16755 | Not Available | - | 3708275 - 3708544 | 9445.84 |
| transporter substrate-binding domain-containing protein | EJD96_RS16760 | Not Available | - | 3708775 - 3709566 | 28757.7 |
| abc transporter permease | EJD96_RS16765 | Not Available | - | 3709580 - 3710353 | 27818.2 |
| abc transporter substrate-binding protein | EJD96_RS16770 | Not Available | - | 3710486 - 3711487 | 36016.7 |
| abc transporter atp-binding protein | EJD96_RS16775 | Not Available | - | 3711484 - 3712257 | 28527.4 |
| sugar nucleotide-binding protein | EJD96_RS16780 | Not Available | - | 3712465 - 3713346 | 32473.8 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | EJD96_RS16785 | Not Available | + | 3713383 - 3714432 | 38229.5 |
| acetylornithine transaminase | EJD96_RS16790 | Not Available | + | 3714852 - 3716054 | 43651.7 |
| c40 family peptidase | EJD96_RS16795 | Not Available | + | 3716091 - 3716627 | 18964.6 |
| fadr/gntr family transcriptional regulator | EJD96_RS16800 | Not Available | - | 3716615 - 3717385 | 28964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.