Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| taxi family trap transporter solute-binding subunit | EJD96_RS16705 | Not Available | - | 3695559 - 3696950 | 50537.8 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS16710 | Not Available | - | 3697059 - 3697820 | 26263.7 |
| fadr/gntr family transcriptional regulator | EJD96_RS16715 | Not Available | - | 3698009 - 3698728 | 26519.0 |
| mfs transporter | EJD96_RS16720 | Not Available | - | 3699007 - 3700332 | 47262.8 |
| m20 aminoacylase family protein | EJD96_RS16725 | Not Available | - | 3700424 - 3701626 | 43138.7 |
| lysr family transcriptional regulator | EJD96_RS16730 | Not Available | + | 3701987 - 3702967 | 36071.8 |
| lysr family transcriptional regulator | EJD96_RS16735 | Not Available | + | 3703074 - 3703979 | 33829.0 |
| putative hydro-lyase | EJD96_RS16740 | Not Available | + | 3704118 - 3704972 | 30144.2 |
| mfs transporter | EJD96_RS16745 | Not Available | + | 3705077 - 3706321 | 45094.2 |
| na+/h+ antiporter | EJD96_RS16750 | Not Available | + | 3706496 - 3708178 | 61526.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.