Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1993 family protein | EJD96_RS01740 | Not Available | - | 321045 - 321548 | 18458.1 |
| efflux transporter outer membrane subunit | EJD96_RS01745 | Not Available | - | 321627 - 323141 | 54064.8 |
| efflux rnd transporter permease subunit | EJD96_RS01750 | Not Available | - | 323175 - 326390 | 115226.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJD96_RS01755 | Not Available | - | 326490 - 327704 | 42109.1 |
| alpha/beta hydrolase | EJD96_RS01760 | Not Available | - | 327715 - 328578 | 30871.5 |
| lysr family transcriptional regulator | EJD96_RS01765 | Not Available | + | 329019 - 330032 | 38142.0 |
| arac family transcriptional regulator | EJD96_RS01770 | Not Available | + | 330332 - 331348 | 37742.6 |
| aldo/keto reductase | EJD96_RS01775 | Not Available | + | 331434 - 332441 | 37467.7 |
| type ii toxin-antitoxin system rele/pare family toxin | EJD96_RS01780 | Not Available | - | 332532 - 332843 | 11612.0 |
| type ii toxin-antitoxin system pard family antitoxin | EJD96_RS01785 | Not Available | - | 332840 - 333109 | 9899.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.