Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | EJD96_RS16605 | Not Available | - | 3672928 - 3673998 | 38652.7 |
| 3-isopropylmalate dehydratase small subunit | EJD96_RS16610 | Not Available | - | 3674114 - 3674761 | 24674.3 |
| entericidin a/b family lipoprotein | EJD96_RS16615 | Not Available | - | 3674869 - 3675000 | 4464.59 |
| 3-isopropylmalate dehydratase large subunit | EJD96_RS16620 | Not Available | - | 3675037 - 3676437 | 50275.2 |
| m48 family metallopeptidase | EJD96_RS16625 | Not Available | - | 3676672 - 3677493 | 29544.6 |
| chorismate synthase | EJD96_RS16630 | Not Available | - | 3677643 - 3678731 | 38728.1 |
| mfs transporter | EJD96_RS16635 | Not Available | - | 3678821 - 3680710 | 69512.5 |
| cbs domain-containing protein | EJD96_RS16640 | Not Available | - | 3680866 - 3681327 | 17038.7 |
| duf962 domain-containing protein | EJD96_RS16645 | Not Available | + | 3681624 - 3681944 | 12403.2 |
| yihy family inner membrane protein | EJD96_RS16650 | Not Available | - | 3681973 - 3683400 | 52438.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.