Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | EJD96_RS16505 | Not Available | - | 3649801 - 3651000 | 45031.0 |
| site-2 protease family protein | EJD96_RS16510 | Not Available | - | 3651043 - 3651705 | 24564.8 |
| l-threonylcarbamoyladenylate synthase | EJD96_RS16515 | Not Available | - | 3651786 - 3652421 | 23514.4 |
| protease htpx | EJD96_RS16520 | Not Available | - | 3652518 - 3653393 | 31012.3 |
| 3',5'-nucleoside bisphosphate phosphatase | EJD96_RS16525 | Not Available | - | 3653461 - 3654303 | 30406.8 |
| alpha/beta fold hydrolase | EJD96_RS16530 | Not Available | - | 3654384 - 3655310 | 35027.0 |
| patatin-like phospholipase family protein | EJD96_RS16535 | Not Available | - | 3655398 - 3656414 | 36863.2 |
| tigr00730 family rossman fold protein | EJD96_RS16540 | Not Available | + | 3656637 - 3657233 | 21701.4 |
| cystathionine gamma-synthase family protein | EJD96_RS16545 | Not Available | - | 3657335 - 3658576 | 45037.8 |
| amidophosphoribosyltransferase | EJD96_RS16550 | Not Available | - | 3658733 - 3660253 | 55981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.