Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | EJD96_RS16455 | Not Available | + | 3636760 - 3637995 | 43391.6 |
| dha2 family efflux mfs transporter permease subunit | EJD96_RS16460 | Not Available | + | 3638029 - 3639606 | 55799.9 |
| dna mismatch repair protein muts | EJD96_RS16465 | Not Available | + | 3640033 - 3642717 | 97913.6 |
| hypothetical protein | EJD96_RS16470 | Not Available | + | 3642758 - 3643684 | 34042.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EJD96_RS16475 | Not Available | - | 3643836 - 3644378 | 19806.7 |
| cupin domain-containing protein | EJD96_RS16480 | Not Available | + | 3644603 - 3645724 | 42850.2 |
| hypothetical protein | EJD96_RS24320 | Not Available | + | 3646067 - 3646339 | 8212.66 |
| mbl fold metallo-hydrolase | EJD96_RS16490 | Not Available | - | 3646719 - 3647504 | 28192.4 |
| outer membrane protein assembly factor bamc | EJD96_RS16495 | Not Available | - | 3647523 - 3648704 | 43324.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EJD96_RS16500 | Not Available | - | 3648766 - 3649644 | 31248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.