Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | EJD96_RS16405 | Not Available | + | 3620823 - 3621767 | 35918.7 |
| nucleobase:cation symporter-2 family protein | EJD96_RS16410 | Not Available | + | 3622047 - 3623441 | 48570.0 |
| allantoate amidohydrolase | EJD96_RS16415 | Not Available | + | 3623694 - 3625457 | 63648.5 |
| ncs2 family permease | EJD96_RS16420 | Not Available | + | 3626247 - 3627545 | 45270.1 |
| xanthine dehydrogenase small subunit | EJD96_RS16425 | Not Available | + | 3627842 - 3629326 | 54225.1 |
| xanthine dehydrogenase molybdopterin binding subunit | EJD96_RS16430 | Not Available | + | 3629370 - 3631739 | 85320.5 |
| xanthine dehydrogenase accessory protein xdhc | EJD96_RS16435 | Not Available | + | 3631761 - 3632849 | 39814.8 |
| guanine deaminase | EJD96_RS16440 | Not Available | + | 3633023 - 3634321 | 47745.4 |
| tetr/acrr family transcriptional regulator | EJD96_RS16445 | Not Available | - | 3634362 - 3634964 | 23150.2 |
| efflux transporter outer membrane subunit | EJD96_RS16450 | Not Available | + | 3635207 - 3636754 | 55139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.