Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EJD96_RS16305 | Not Available | + | 3587210 - 3588529 | 48441.6 |
| hypothetical protein | EJD96_RS16310 | Not Available | + | 3588817 - 3589005 | 6695.96 |
| tonb-dependent receptor | EJD96_RS16315 | Not Available | - | 3589123 - 3591390 | 82255.5 |
| duf3325 domain-containing protein | EJD96_RS16320 | Not Available | - | 3591730 - 3592092 | 12914.4 |
| pepsy-associated tm helix domain-containing protein | EJD96_RS16325 | Not Available | - | 3592089 - 3593729 | 59644.3 |
| duf3649 domain-containing protein | EJD96_RS16330 | Not Available | - | 3593726 - 3594031 | 10624.4 |
| duf4198 domain-containing protein | EJD96_RS16335 | Not Available | - | 3594107 - 3594826 | 25591.6 |
| carbonate dehydratase | EJD96_RS16340 | Not Available | + | 3595167 - 3595727 | 19998.8 |
| hypothetical protein | EJD96_RS16345 | Not Available | - | 3596027 - 3596503 | 18429.3 |
| is3 family transposase | EJD96_RS16350 | Not Available | + | 3596675 - 3597855 | 44118.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.