Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hded family acid-resistance protein | EJD96_RS16255 | Not Available | - | 3578110 - 3579519 | 52088.4 |
| ydcf family protein | EJD96_RS16260 | Not Available | + | 3579638 - 3580447 | 28987.5 |
| methyl-accepting chemotaxis protein | EJD96_RS16265 | Not Available | + | 3580676 - 3582511 | 63533.6 |
| nrsf family protein | EJD96_RS16270 | Not Available | - | 3582616 - 3583257 | 22929.8 |
| sigma-70 family rna polymerase sigma factor | EJD96_RS16275 | Not Available | - | 3583254 - 3583883 | 23239.1 |
| duf1109 domain-containing protein | EJD96_RS16280 | Not Available | - | 3583899 - 3584564 | 23129.1 |
| duf2282 domain-containing protein | EJD96_RS16285 | Not Available | + | 3584813 - 3585091 | 9451.47 |
| duf692 domain-containing protein | EJD96_RS16290 | Not Available | + | 3585112 - 3585963 | 30867.8 |
| dna-binding domain-containing protein | EJD96_RS16295 | Not Available | + | 3585960 - 3586715 | 27415.4 |
| doxx family protein | EJD96_RS16300 | Not Available | + | 3586728 - 3587198 | 17109.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.