Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EJD96_RS16210 | Not Available | - | 3569567 - 3571048 | 55812.1 |
| Trna-met | Not Available | Not Available | + | 3571128 - 3571204 | Not Available |
| nudix hydrolase | EJD96_RS16220 | Not Available | + | 3571403 - 3571969 | 21590.6 |
| leucyl/phenylalanyl-trna--protein transferase | EJD96_RS16225 | Not Available | + | 3571984 - 3572727 | 27545.2 |
| arginyltransferase | EJD96_RS16230 | Not Available | + | 3572865 - 3573593 | 28157.2 |
| quinone-dependent dihydroorotate dehydrogenase | EJD96_RS16235 | Not Available | + | 3573757 - 3574821 | 37866.7 |
| hypothetical protein | EJD96_RS24115 | Not Available | - | 3574960 - 3575103 | 5288.48 |
| gamma-glutamylcyclotransferase | EJD96_RS16240 | Not Available | + | 3575290 - 3575889 | 22166.2 |
| nad-gh domain containing protein | EJD96_RS16245 | Not Available | + | 3575925 - 3576347 | 14790.9 |
| alpha/beta hydrolase | EJD96_RS16250 | Not Available | - | 3577265 - 3578113 | 31063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.