Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | EJD96_RS16160 | Not Available | - | 3557739 - 3558170 | 17174.8 |
| site-specific integrase | EJD96_RS16165 | Not Available | + | 3558610 - 3559728 | 42448.3 |
| mobf family relaxase | EJD96_RS16170 | Not Available | + | 3559831 - 3562755 | 109171.0 |
| hypothetical protein | EJD96_RS16175 | Not Available | + | 3562767 - 3563108 | 12656.9 |
| p-loop ntpase fold protein | EJD96_RS16180 | Not Available | + | 3563254 - 3564753 | 57217.1 |
| pin domain-containing protein | EJD96_RS16185 | Not Available | - | 3564843 - 3566054 | 45472.5 |
| hypothetical protein | EJD96_RS16190 | Not Available | + | 3566269 - 3567063 | 28918.2 |
| response regulator | EJD96_RS16195 | Not Available | + | 3567030 - 3567737 | 26179.2 |
| hypothetical protein | EJD96_RS16200 | Not Available | + | 3567817 - 3568779 | 35609.9 |
| hypothetical protein | EJD96_RS16205 | Not Available | - | 3568813 - 3569508 | 26439.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.