Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | EJD96_RS16110 | Not Available | + | 3544537 - 3546225 | 62067.0 |
| hypothetical protein | EJD96_RS16115 | Not Available | - | 3547519 - 3547713 | 7444.11 |
| hypothetical protein | EJD96_RS16120 | Not Available | - | 3547726 - 3548499 | 28948.8 |
| atp-dependent helicase | EJD96_RS16125 | Not Available | - | 3548612 - 3550444 | 68943.7 |
| atp-dependent nuclease | EJD96_RS16130 | Not Available | - | 3550444 - 3552297 | 68540.3 |
| hypothetical protein | EJD96_RS16135 | Not Available | - | 3552446 - 3552685 | 8402.26 |
| hypothetical protein | EJD96_RS16140 | Not Available | + | 3553004 - 3553435 | 16845.3 |
| duf2971 domain-containing protein | EJD96_RS16145 | Not Available | + | 3553524 - 3554954 | 54912.1 |
| type iv secretion system dna-binding domain-containing protein | EJD96_RS16150 | Not Available | - | 3555034 - 3556917 | 71076.1 |
| hypothetical protein | EJD96_RS16155 | Not Available | + | 3557111 - 3557704 | 23262.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.