Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | EJD96_RS15750 | Not Available | - | 3488786 - 3489640 | 29063.8 |
| oxygen-independent coproporphyrinogen iii oxidase | EJD96_RS15755 | Not Available | - | 3489653 - 3491104 | 54947.8 |
| hypothetical protein | EJD96_RS15760 | Not Available | + | 3491429 - 3492109 | 23923.2 |
| aromatic amino acid dmt transporter yddg | EJD96_RS15765 | Not Available | - | 3492097 - 3493020 | 32269.2 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | EJD96_RS15770 | Not Available | + | 3493178 - 3493834 | 24515.2 |
| mfs transporter | EJD96_RS15775 | Not Available | + | 3493936 - 3495093 | 40061.1 |
| acetylornithine deacetylase | EJD96_RS15780 | Not Available | - | 3495165 - 3496367 | 43678.2 |
| response regulator | EJD96_RS15785 | Not Available | + | 3496758 - 3497222 | 17282.8 |
| hypothetical protein | EJD96_RS15790 | Not Available | - | 3497289 - 3497573 | 11250.1 |
| ggdef domain-containing protein | EJD96_RS15795 | Not Available | + | 3497833 - 3498843 | 36785.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.