Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarate/nitrate reduction transcriptional regulator fnr | EJD96_RS15700 | Not Available | + | 3479309 - 3480145 | 30912.2 |
| hypothetical protein | EJD96_RS15705 | Not Available | - | 3480226 - 3480477 | 9425.59 |
| fixh family protein | EJD96_RS15710 | Not Available | - | 3480550 - 3481122 | 21133.2 |
| cytochrome c oxidase accessory protein ccog | EJD96_RS15715 | Not Available | - | 3481153 - 3482625 | 55689.8 |
| cytochrome-c oxidase, cbb3-type subunit iii | EJD96_RS15720 | Not Available | - | 3482767 - 3483699 | 33838.3 |
| cbb3-type cytochrome oxidase subunit 3 | EJD96_RS15725 | Not Available | - | 3483692 - 3483886 | 7204.71 |
| cytochrome-c oxidase, cbb3-type subunit ii | EJD96_RS15730 | Not Available | - | 3483891 - 3484505 | 23235.8 |
| cytochrome-c oxidase, cbb3-type subunit i | EJD96_RS15735 | Not Available | - | 3484519 - 3485946 | 53439.3 |
| cbb3-type cytochrome oxidase assembly protein ccos | EJD96_RS15740 | Not Available | - | 3486091 - 3486264 | 6247.48 |
| heavy metal translocating p-type atpase | EJD96_RS15745 | Not Available | - | 3486264 - 3488783 | 88497.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.