Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS15650 | Not Available | + | 3468808 - 3468996 | 7122.48 |
| efflux transporter outer membrane subunit | EJD96_RS15655 | Not Available | - | 3469015 - 3470490 | 51750.2 |
| mdr family mfs transporter | EJD96_RS15660 | Not Available | - | 3470490 - 3472058 | 54916.1 |
| hlyd family secretion protein | EJD96_RS15665 | Not Available | - | 3472055 - 3473248 | 42852.6 |
| marr family winged helix-turn-helix transcriptional regulator | EJD96_RS15670 | Not Available | + | 3473361 - 3473873 | 18465.9 |
| prolyl aminopeptidase | EJD96_RS15675 | Not Available | - | 3473972 - 3474952 | 36725.3 |
| lrp/asnc family transcriptional regulator | EJD96_RS15680 | Not Available | - | 3475071 - 3475532 | 17391.4 |
| 1-aminocyclopropane-1-carboxylate deaminase | EJD96_RS15685 | Not Available | + | 3475728 - 3476792 | 38403.0 |
| ompw/alkl family protein | EJD96_RS15690 | Not Available | + | 3476981 - 3477604 | 22351.8 |
| fatty acid desaturase | EJD96_RS15695 | Not Available | + | 3477815 - 3478936 | 42991.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.