Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m20 aminoacylase family protein | EJD96_RS15600 | Not Available | - | 3454472 - 3455671 | 43373.7 |
| m20 family metallopeptidase | EJD96_RS15605 | Not Available | - | 3455668 - 3457089 | 51572.1 |
| atp-binding cassette domain-containing protein | EJD96_RS15610 | Not Available | - | 3457122 - 3457964 | 30512.2 |
| abc transporter atp-binding protein | EJD96_RS15615 | Not Available | - | 3457961 - 3458965 | 36542.0 |
| abc transporter permease | EJD96_RS15620 | Not Available | - | 3458987 - 3459904 | 32387.8 |
| abc transporter permease | EJD96_RS15625 | Not Available | - | 3459922 - 3460839 | 33291.7 |
| abc transporter substrate-binding protein | EJD96_RS15630 | Not Available | - | 3460966 - 3462504 | 56790.2 |
| lysr family transcriptional regulator | EJD96_RS15635 | Not Available | + | 3462800 - 3463711 | 33778.2 |
| biotin/lipoyl-binding protein | EJD96_RS15640 | Not Available | - | 3463861 - 3464697 | 30140.5 |
| s8 family serine peptidase | EJD96_RS15645 | Not Available | - | 3464854 - 3468654 | 128728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.