Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | + | 3435073 - 3435148 | Not Available |
| aromatic amino acid transaminase | EJD96_RS15510 | Not Available | - | 3435277 - 3436494 | 43855.6 |
| excinuclease abc subunit uvrb | EJD96_RS15515 | Not Available | + | 3436918 - 3438999 | 78835.4 |
| uracil-dna glycosylase | EJD96_RS15520 | Not Available | + | 3439086 - 3439886 | 28514.3 |
| methyl-accepting chemotaxis protein | EJD96_RS15525 | Not Available | - | 3439900 - 3441954 | 71267.0 |
| hypothetical protein | EJD96_RS15530 | Not Available | - | 3442405 - 3442659 | 9470.29 |
| lysr substrate-binding domain-containing protein | EJD96_RS15535 | Not Available | + | 3442763 - 3443701 | 34940.1 |
| putative quinol monooxygenase | EJD96_RS15540 | Not Available | - | 3443929 - 3444246 | 11581.0 |
| metal abc transporter substrate-binding protein | EJD96_RS15545 | Not Available | - | 3444323 - 3445261 | 33981.5 |
| metal abc transporter permease | EJD96_RS15550 | Not Available | - | 3445291 - 3446178 | 30910.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.