Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | EJD96_RS15455 | Not Available | + | 3422319 - 3423086 | 27993.2 |
| 5-dehydro-4-deoxyglucarate dehydratase | EJD96_RS15460 | Not Available | + | 3423408 - 3424328 | 33190.9 |
| methyl-accepting chemotaxis protein | EJD96_RS15465 | Not Available | - | 3424506 - 3426296 | 62972.7 |
| lactonase family protein | EJD96_RS15470 | Not Available | - | 3426588 - 3427685 | 38673.5 |
| galactarate dehydratase | EJD96_RS15475 | Not Available | - | 3427797 - 3429365 | 56090.3 |
| mfs transporter | EJD96_RS15480 | Not Available | - | 3429441 - 3430784 | 48538.4 |
| permease | EJD96_RS15485 | Not Available | + | 3431176 - 3432240 | 37551.1 |
| trna 2-selenouridine(34) synthase mnmh | EJD96_RS15490 | Not Available | - | 3432247 - 3433338 | 40898.1 |
| selenide, water dikinase seld | EJD96_RS15495 | Not Available | - | 3433338 - 3434372 | 36004.4 |
| Trna-asn | Not Available | Not Available | + | 3434817 - 3434892 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.