Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | + | 3353532 - 3353607 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3353682 - 3353757 | Not Available |
| glutamate--trna ligase | EJD96_RS15120 | Not Available | - | 3353831 - 3355231 | 51961.5 |
| iron-sulfur cluster carrier protein apbc | EJD96_RS15125 | Not Available | - | 3355366 - 3356454 | 38616.3 |
| methionine--trna ligase | EJD96_RS15130 | Not Available | + | 3356684 - 3358762 | 77079.7 |
| gnat family n-acetyltransferase | EJD96_RS15135 | Not Available | + | 3358806 - 3359285 | 17856.2 |
| sugar-binding transcriptional regulator | EJD96_RS15140 | Not Available | + | 3359508 - 3360488 | 35281.9 |
| abc transporter atp-binding protein | EJD96_RS15145 | Not Available | + | 3360520 - 3361569 | 38016.0 |
| abc transporter substrate-binding protein | EJD96_RS15150 | Not Available | + | 3361631 - 3362923 | 46987.1 |
| carbohydrate abc transporter permease | EJD96_RS15155 | Not Available | + | 3362949 - 3363824 | 32618.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.