Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | EJD96_RS15010 | Not Available | + | 3335338 - 3335913 | 21630.9 |
| fadr/gntr family transcriptional regulator | EJD96_RS15015 | Not Available | - | 3336228 - 3337064 | 29580.9 |
| d-erythronate dehydrogenase | EJD96_RS15020 | Not Available | + | 3337203 - 3338177 | 34912.3 |
| 3-hydroxyisobutyrate dehydrogenase | EJD96_RS15025 | Not Available | - | 3338255 - 3339148 | 30526.2 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EJD96_RS15030 | Not Available | - | 3339159 - 3340667 | 54012.0 |
| abc transporter substrate-binding protein | EJD96_RS15035 | Not Available | - | 3340743 - 3341975 | 44011.7 |
| lysr family transcriptional regulator | EJD96_RS15040 | Not Available | + | 3342180 - 3343097 | 34680.4 |
| dj-1/pfpi family protein | EJD96_RS15045 | Not Available | + | 3343189 - 3343770 | 20349.5 |
| methyl-accepting chemotaxis protein | EJD96_RS15050 | Not Available | + | 3344294 - 3345940 | 58227.5 |
| rna polymerase sigma factor | EJD96_RS15055 | Not Available | + | 3346056 - 3346643 | 22111.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.