Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vesicle formation protein | EJD96_RS14910 | Not Available | - | 3311402 - 3312247 | 31138.3 |
| hypothetical protein | EJD96_RS14915 | Not Available | - | 3312384 - 3315938 | 120038.0 |
| peptidase domain-containing abc transporter | EJD96_RS14920 | Not Available | - | 3315986 - 3317593 | 57404.7 |
| tolc family protein | EJD96_RS14925 | Not Available | - | 3318543 - 3319790 | 45789.1 |
| tetratricopeptide repeat protein | EJD96_RS14930 | Not Available | - | 3320229 - 3321941 | 63339.5 |
| peptide-methionine (s)-s-oxide reductase msra | EJD96_RS14935 | Not Available | - | 3322011 - 3322700 | 24611.3 |
| sulfite oxidase heme-binding subunit yedz | EJD96_RS14940 | Not Available | - | 3322741 - 3323382 | 24263.9 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EJD96_RS14945 | Not Available | - | 3323395 - 3324363 | 36221.7 |
| heavy metal response regulator transcription factor | EJD96_RS14950 | Not Available | + | 3324561 - 3325232 | 25400.9 |
| heavy metal sensor histidine kinase | EJD96_RS14955 | Not Available | + | 3325229 - 3326650 | 52040.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.