Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS14760 | Not Available | + | 3278152 - 3278436 | 10426.5 |
| putative toxin-antitoxin system toxin component, pin family | EJD96_RS14765 | Not Available | + | 3278455 - 3278970 | 18932.1 |
| pyridoxal phosphate-dependent aminotransferase | EJD96_RS14770 | Not Available | + | 3279034 - 3280191 | 41990.7 |
| glutathione binding-like protein | EJD96_RS14775 | Not Available | + | 3280274 - 3280966 | 26112.2 |
| sensor domain-containing diguanylate cyclase | EJD96_RS14780 | Not Available | - | 3281000 - 3282835 | 68313.2 |
| maoc family dehydratase | EJD96_RS14785 | Not Available | - | 3283043 - 3283498 | 16677.3 |
| diguanylate cyclase | EJD96_RS14790 | Not Available | - | 3283536 - 3284561 | 37991.4 |
| chemotaxis response regulator protein-glutamate methylesterase | EJD96_RS14795 | Not Available | - | 3284573 - 3285601 | 35803.9 |
| hybrid sensor histidine kinase/response regulator | EJD96_RS14800 | Not Available | - | 3285601 - 3287928 | 83615.5 |
| chemotaxis protein chew | EJD96_RS14805 | Not Available | - | 3287925 - 3288587 | 23766.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.