Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | EJD96_RS14660 | Not Available | - | 3257237 - 3258415 | 43437.2 |
| hypothetical protein | EJD96_RS14665 | Not Available | - | 3258534 - 3258965 | 14965.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | EJD96_RS14670 | Not Available | - | 3258965 - 3260341 | 50446.8 |
| hypothetical protein | EJD96_RS14675 | Not Available | - | 3260505 - 3261137 | 24361.1 |
| duf6402 family protein | EJD96_RS14680 | Not Available | - | 3261113 - 3262441 | 51623.8 |
| polyhydroxyalkanoate synthesis repressor phar | EJD96_RS14685 | Not Available | - | 3262568 - 3263134 | 21543.8 |
| 3-ketoacyl-acp reductase | EJD96_RS14690 | Not Available | - | 3263462 - 3264202 | 26305.4 |
| class i poly(r)-hydroxyalkanoic acid synthase | EJD96_RS14695 | Not Available | - | 3264451 - 3266232 | 65631.1 |
| hypothetical protein | EJD96_RS14700 | Not Available | + | 3266290 - 3266559 | 10108.4 |
| hypothetical protein | EJD96_RS14705 | Not Available | - | 3266712 - 3266972 | 10063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.