Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase assembly factor 2 | EJD96_RS14560 | Not Available | - | 3236551 - 3236835 | 10946.1 |
| succinate dehydrogenase iron-sulfur subunit | EJD96_RS14565 | Not Available | - | 3236966 - 3237676 | 26894.6 |
| succinate dehydrogenase flavoprotein subunit | EJD96_RS14570 | Not Available | - | 3237688 - 3239466 | 64901.6 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | EJD96_RS14575 | Not Available | - | 3239469 - 3239834 | 13647.9 |
| succinate dehydrogenase, cytochrome b556 subunit | EJD96_RS14580 | Not Available | - | 3239837 - 3240247 | 15254.2 |
| gntr family transcriptional regulator | EJD96_RS14585 | Not Available | - | 3240424 - 3241209 | 29038.8 |
| malate dehydrogenase | EJD96_RS14590 | Not Available | + | 3241677 - 3242666 | 35315.6 |
| hpch/hpai aldolase/citrate lyase family protein | EJD96_RS14595 | Not Available | + | 3242760 - 3243761 | 36074.9 |
| hypothetical protein | EJD96_RS14600 | Not Available | + | 3243783 - 3244331 | 19228.1 |
| aconitate hydratase acna | EJD96_RS14605 | Not Available | + | 3244490 - 3247201 | 97436.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.