Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | EJD96_RS14510 | Not Available | - | 3222373 - 3223110 | 26338.3 |
| flagellar brake protein | EJD96_RS14515 | Not Available | - | 3223195 - 3224142 | 34532.9 |
| atp-dependent dna helicase | EJD96_RS14520 | Not Available | - | 3224144 - 3226216 | 75947.3 |
| ydch family protein | EJD96_RS14525 | Not Available | - | 3226518 - 3226724 | 8154.09 |
| hypothetical protein | EJD96_RS14530 | Not Available | - | 3226821 - 3227690 | 32371.6 |
| cell division protein zape | EJD96_RS14535 | Not Available | - | 3227717 - 3228814 | 42128.6 |
| dihydrolipoyl dehydrogenase | EJD96_RS14540 | Not Available | - | 3228961 - 3230388 | 50114.2 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EJD96_RS14545 | Not Available | - | 3230514 - 3231755 | 43707.6 |
| 2-oxoglutarate dehydrogenase e1 component | EJD96_RS14550 | Not Available | - | 3231844 - 3234708 | 106134.0 |
| citrate synthase | EJD96_RS14555 | Not Available | - | 3235080 - 3236381 | 48476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.