Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 3182340 - 3182424 | Not Available |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EJD96_RS24460 | Not Available | + | 3182630 - 3183784 | 42429.0 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS14370 | Not Available | - | 3183835 - 3187098 | 116833.0 |
| cache domain-containing protein | EJD96_RS14375 | Not Available | + | 3187295 - 3188350 | 38874.4 |
| luxr c-terminal-related transcriptional regulator | EJD96_RS14380 | Not Available | + | 3188491 - 3189132 | 23520.6 |
| penicillin-binding protein 1c | EJD96_RS14385 | Not Available | - | 3189410 - 3191683 | 82734.1 |
| alpha-2-macroglobulin family protein | EJD96_RS14390 | Not Available | - | 3191689 - 3197580 | 212740.0 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS14395 | Not Available | - | 3197686 - 3198096 | 15282.2 |
| outer membrane protein assembly factor bame | EJD96_RS14400 | Not Available | - | 3198132 - 3198554 | 15510.5 |
| hypothetical protein | EJD96_RS24310 | Not Available | - | 3198565 - 3199506 | 33233.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.