Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tcpq domain-containing protein | EJD96_RS14305 | Not Available | + | 3171041 - 3171463 | 15437.4 |
| secretin n-terminal domain-containing protein | EJD96_RS14310 | Not Available | + | 3171482 - 3173197 | 59624.9 |
| type 4b pilus protein pilo2 | EJD96_RS14315 | Not Available | + | 3173190 - 3174569 | 49867.2 |
| hypothetical protein | EJD96_RS14320 | Not Available | + | 3174547 - 3175275 | 25533.5 |
| gspe/pule family protein | EJD96_RS14325 | Not Available | + | 3175272 - 3176972 | 61773.5 |
| type ii secretion system f family protein | EJD96_RS14330 | Not Available | + | 3176969 - 3178057 | 40569.8 |
| polymer-forming cytoskeletal protein | EJD96_RS14335 | Not Available | + | 3178054 - 3180357 | 81788.8 |
| hypothetical protein | EJD96_RS14340 | Not Available | + | 3180361 - 3180684 | 11530.6 |
| lytic transglycosylase domain-containing protein | EJD96_RS14345 | Not Available | + | 3180685 - 3181137 | 16367.8 |
| prepilin peptidase | EJD96_RS14350 | Not Available | + | 3181191 - 3182069 | 31297.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.