Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EJD96_RS14255 | Not Available | + | 3162178 - 3163059 | 30809.4 |
| branched-chain amino acid abc transporter permease | EJD96_RS14260 | Not Available | + | 3163061 - 3163936 | 31287.3 |
| abc transporter atp-binding protein | EJD96_RS14265 | Not Available | + | 3163936 - 3164697 | 28181.4 |
| abc transporter atp-binding protein | EJD96_RS14270 | Not Available | + | 3164694 - 3165425 | 25840.7 |
| Trna-leu | Not Available | Not Available | + | 3165548 - 3165632 | Not Available |
| Trna-leu | Not Available | Not Available | + | 3166247 - 3166331 | Not Available |
| atp-binding protein | EJD96_RS14285 | Not Available | + | 3166792 - 3168612 | 67418.6 |
| type ii secretion system protein | EJD96_RS14290 | Not Available | + | 3168819 - 3169538 | 24008.8 |
| type ii secretion system protein j | EJD96_RS14295 | Not Available | + | 3169608 - 3170249 | 22092.7 |
| type ii secretion system protein | EJD96_RS14300 | Not Available | + | 3170258 - 3170968 | 24860.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.