Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | + | 3136886 - 3136962 | Not Available |
| Trna-arg | Not Available | Not Available | + | 3137059 - 3137135 | Not Available |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS14165 | Not Available | + | 3137346 - 3137669 | 12791.4 |
| mcp four helix bundle domain-containing protein | EJD96_RS14170 | Not Available | + | 3138315 - 3138962 | 23284.4 |
| duf4440 domain-containing protein | EJD96_RS14175 | Not Available | + | 3139095 - 3139592 | 18145.6 |
| methyl-accepting chemotaxis protein | EJD96_RS14180 | Not Available | - | 3139778 - 3141397 | 57595.0 |
| methyl-accepting chemotaxis protein | EJD96_RS14185 | Not Available | - | 3141555 - 3143162 | 56216.8 |
| gnat family n-acetyltransferase | EJD96_RS14190 | Not Available | - | 3143472 - 3143930 | 17340.8 |
| duf3300 domain-containing protein | EJD96_RS14195 | Not Available | + | 3144343 - 3145869 | 58913.4 |
| peptide chain release factor 3 | EJD96_RS14200 | Not Available | + | 3146099 - 3147787 | 62226.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.