Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kinase inhibitor | EJD96_RS14105 | Not Available | + | 3124943 - 3125521 | 19947.6 |
| helix-turn-helix transcriptional regulator | EJD96_RS14110 | Not Available | + | 3125511 - 3126341 | 30558.9 |
| hypothetical protein | EJD96_RS24110 | Not Available | + | 3126521 - 3126952 | 12423.9 |
| mgtc/sapb family protein | EJD96_RS14120 | Not Available | + | 3127180 - 3127671 | 17720.9 |
| ynfa family protein | EJD96_RS14125 | Not Available | + | 3127698 - 3128015 | 11574.5 |
| mfs transporter | EJD96_RS14130 | Not Available | + | 3128364 - 3129671 | 45823.0 |
| nitrite reductase large subunit nirb | EJD96_RS14135 | Not Available | + | 3129683 - 3132256 | 93566.7 |
| nitrite reductase small subunit nird | EJD96_RS14140 | Not Available | + | 3132403 - 3132765 | 13081.5 |
| nad(p)/fad-dependent oxidoreductase | EJD96_RS14145 | Not Available | + | 3132767 - 3134008 | 44892.3 |
| nitrate reductase | EJD96_RS14150 | Not Available | + | 3134050 - 3136818 | 100203.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.