Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS14060 | Not Available | + | 3117259 - 3117549 | 10765.1 |
| porin | EJD96_RS14065 | Not Available | - | 3117669 - 3118808 | 39567.6 |
| hypothetical protein | EJD96_RS24300 | Not Available | + | 3119048 - 3119431 | 14102.9 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS14070 | Not Available | + | 3119455 - 3120189 | 25954.7 |
| abc transporter atp-binding protein | EJD96_RS14075 | Not Available | + | 3120183 - 3121019 | 29544.8 |
| mlad family protein | EJD96_RS14080 | Not Available | + | 3121019 - 3121936 | 32244.5 |
| abc-type transport auxiliary lipoprotein family protein | EJD96_RS14085 | Not Available | + | 3121933 - 3122547 | 22256.6 |
| lysr family transcriptional regulator | EJD96_RS14090 | Not Available | + | 3122665 - 3123591 | 34200.0 |
| lrgb family protein | EJD96_RS14095 | Not Available | - | 3123624 - 3124361 | 25826.5 |
| cida/lrga family protein | EJD96_RS14100 | Not Available | - | 3124361 - 3124729 | 12632.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.