Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase n-terminal domain-containing protein | EJD96_RS13960 | Not Available | - | 3097645 - 3098505 | 31407.8 |
| lysr family transcriptional regulator | EJD96_RS13965 | Not Available | + | 3098711 - 3099676 | 35919.4 |
| sulfite exporter taue/safe family protein | EJD96_RS13970 | Not Available | - | 3099682 - 3100446 | 26954.9 |
| hypothetical protein | EJD96_RS24420 | Not Available | + | 3100459 - 3100590 | 4843.33 |
| sdr family oxidoreductase | EJD96_RS13975 | Not Available | + | 3100676 - 3101464 | 27289.7 |
| Trna-ser | Not Available | Not Available | + | 3101616 - 3101705 | Not Available |
| site-specific integrase | EJD96_RS13985 | Not Available | + | 3101808 - 3103451 | 62039.0 |
| helix-turn-helix domain-containing protein | EJD96_RS13990 | Not Available | - | 3103458 - 3103703 | 8802.65 |
| hypothetical protein | EJD96_RS14000 | Not Available | + | 3104123 - 3104497 | 14165.2 |
| recombinase family protein | EJD96_RS14005 | Not Available | - | 3104854 - 3105438 | 21004.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.